Projects

Selected projects and case studies

Projects and case studies organised by area of work.

RNA

3′ mRNA-Seq

A modular pipeline for gene expression profiling through 3′-end transcript sequencing.

RNA-Seq Workflow

A Nextflow workflow from FASTQ preprocessing and STAR alignment to BAM files and gene, exon and transcript count tables.

DNA

Projects in this area will be added as their pages are completed.

Single-cell

Projects in this area will be added as their pages are completed.

RStudio

Neochord LSTM Model

An LSTM-based predictive model for clinical time-series analysis, developed with R and RStudio.